Index A | B | C | D | E | F | G | I | L | M | N | P | R | S | T | V A ancestors_of() (in module s1_helpers) B build_mofa_matrix_input() (in module s2_helpers) C clean_graph() (in module s1_helpers) coexpression_network() (in module s1_helpers) coexpression_partners() (in module s1_helpers) coexpression_threshold_sweep() (in module s1_helpers) correlation_matrix() (in module s1_helpers) D datatype_summary() (in module s1_helpers) diseases_for_genes() (in module s1_helpers) draw_network_with_node_attrs() (in module s1_helpers) E edges_of_type() (in module s1_helpers) eta_squared_by_factor() (in module s2_helpers) evaluate_predictions() (in module s2_helpers) evidence_for_pair() (in module s1_helpers) F filter_by_datatype() (in module s1_helpers) fit_factor_classifier() (in module s2_helpers) fit_mofa() (in module s2_helpers) G gen_graph_legend() (in module s1_helpers) gene_by_symbol() (in module s1_helpers) generate_diagnostic_plots() (in module s2_helpers) genes_for_disease() (in module s1_helpers) get_highest_degree_nodes() (in module s1_helpers) I icd10_for_disease() (in module s1_helpers) L load_evidence() (in module s1_helpers) load_expression() (in module s1_helpers) load_kg() (in module s1_helpers) load_omics() (in module s1_helpers) (in module s2_helpers) M map_genes_to_kg() (in module s1_helpers) module s1_helpers s2_helpers N nodes_of_type() (in module s1_helpers) P plot_confusion_matrix() (in module s2_helpers) plot_degree_distribution() (in module s1_helpers) plot_factor_boxplots_by_subtype() (in module s2_helpers) plot_r2_heatmap() (in module s2_helpers) print_graph_info() (in module s1_helpers) project_test_patients_to_mofa_factors() (in module s2_helpers) R remove_by_degree() (in module s1_helpers) S s1_helpers module s2_helpers module select_active_factors() (in module s2_helpers) shared_gene_projection() (in module s1_helpers) shared_genes_between() (in module s1_helpers) strip_ensembl_version() (in module s1_helpers) T threshold_sparsification() (in module s1_helpers) top_percentage_sparsification() (in module s1_helpers) V visualise_edge_weight_distribution() (in module s1_helpers) visualise_graph() (in module s1_helpers)
